abm_colony_collection

Collection of tasks for analyzing colony dynamics.

calculate_centrality_measures	Calculate centrality measures for each node in network.
calculate_degree_measures	Calculate degree measures for each node in network.
calculate_distance_measures	Calculate distance measures for each node in network.
convert_to_network	Convert lists of neighbors to a network object.
get_depth_map	Get map of id to depth starting from depth = 1 at the edge if the region.
get_neighbors_map	Create map of region ids to lists of neighbors.
make_voxels_array	Convert list of locations to a segmentated image array.